Technical Overview, pgel.pl

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This script generates a two-dimensional gel view of the proteins identified in the GPM result file.

The required arguments are path, proex, npep and ltype. path is the path to the result file being viewed. proex is used to generate links to other GPMDB resources. npep and ltype are used to control the look and content of the page.

Display Elements

  • a bar of links to further GPMDB resources applicable to this data file.
  • an SVG-generated two dimensional gel of the identified proteins in the result file.
  • a list of tunable parameters for the display of the gel.
    • both the bars and plotted dots correspond to proteins, and if clicked, will bring up the protein.pl page corresponding to that protein identification in this GPM result file.
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