(14 intermediate revisions not shown) | |||
Line 1: | Line 1: | ||
HS PLUS is a collection of human protein sequences to be used in addition to the ENSEMBL collection protein sequences. | HS PLUS is a collection of human protein sequences to be used in addition to the ENSEMBL collection protein sequences. | ||
- | == | + | ==H-InvDB Proteins== |
- | {| class="wikitable" | + | {| class="wikitable sortable" cellpadding="1" cellspacing="2" |
- | ! Accession | + | ! scope="col" | Accession |
- | ! Type | + | ! scope="col" | Type |
- | ! Example SV | + | ! scope="col" | Example SV |
- | ! Chr | + | ! scope="col" | Chr |
- | ! Start | + | ! scope="col" | Start |
- | ! align="left"| Description | + | ! scope="col" | End |
+ | ! scope="col" class="unsortable"| Strand | ||
+ | ! scope="col" align="left"| Description | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000257735 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000257735 HIP000257735.1] |
| HV | | HV | ||
- | | | + | | — |
- | | | + | | 6_apd_hap1 |
- | | | + | | 3098081 |
+ | | 3100314 | ||
+ | | + | ||
| align="left"| Heat shock 70 kDa protein 1A/1B | | align="left"| Heat shock 70 kDa protein 1A/1B | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000046027 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000046027 HIP000046027.1] |
| IG-C | | IG-C | ||
+ | | — | ||
+ | | 14 | ||
+ | | 106207685 | ||
+ | | 106725733 | ||
| - | | - | ||
- | |||
- | |||
| align="left"| Ig gamma-1 chain C region | | align="left"| Ig gamma-1 chain C region | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000046082 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000046082 HIP000046082.1] |
| IG-C | | IG-C | ||
- | | | + | | — |
- | | | + | | 14 |
- | | | + | | 106202680 |
+ | | 106791519 | ||
+ | | - | ||
| align="left"| Similar to Ig gamma-1 chain C region | | align="left"| Similar to Ig gamma-1 chain C region | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000046058 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000046058 HIP000046058.1] |
| IG-H | | IG-H | ||
- | | | + | | — |
+ | | — | ||
+ | | — | ||
+ | | — | ||
| | | | ||
- | |||
| align="left"| Ig heavy variable | | align="left"| Ig heavy variable | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000147131 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000147131 HIP000147131.1] |
| IG-L | | IG-L | ||
- | | | + | | — |
- | | | + | | 22 |
- | | | + | | 22735202 |
+ | | 23248967 | ||
+ | | + | ||
| align="left"| Similar to Ig lambda-2 chain C regions | | align="left"| Similar to Ig lambda-2 chain C regions | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000025842 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000025842 HIP000025842.1] |
| SV | | SV | ||
| ENSP00000262710 | | ENSP00000262710 | ||
- | | | + | | 14 |
- | | | + | | 23527776 |
+ | | 23564332 | ||
+ | | - | ||
| align="left"| Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5. | | align="left"| Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5. | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000210721 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000210721 HIP000210721.1] |
| SV | | SV | ||
| ENSP00000369528 | | ENSP00000369528 | ||
- | | | + | | 10 |
- | | | + | | 5807192 |
+ | | 5811376 | ||
+ | | - | ||
| align="left"| Similar to Rab GDP dissociation inhibitor beta | | align="left"| Similar to Rab GDP dissociation inhibitor beta | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000104615 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000104615 HIP000104615.1] |
| SV | | SV | ||
| ENSP00000341168 | | ENSP00000341168 | ||
- | | | + | | 5 |
- | | | + | | 170818369 |
+ | | 170837886 | ||
+ | | + | ||
| align="left"| Similar to Nucleophosmin | | align="left"| Similar to Nucleophosmin | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000022213 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000022213 HIP000022213.1] |
| SV | | SV | ||
| ENSP00000456022 | | ENSP00000456022 | ||
- | | | + | | 16 |
- | | | + | | 69404113 |
+ | | 69419874 | ||
+ | | - | ||
| align="left"| Similar to Telomeric repeat-binding factor 2 | | align="left"| Similar to Telomeric repeat-binding factor 2 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000022571 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000022571 HIP000022571.1] |
| SV | | SV | ||
| ENSP00000300408 | | ENSP00000300408 | ||
- | | | + | | 17 |
- | | | + | | 47482353 |
+ | | 47490627 | ||
+ | | - | ||
| align="left"| Prohibitin | | align="left"| Prohibitin | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000057656 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000057656 HIP000057656.1] |
| SV | | SV | ||
| ENSP00000380068 | | ENSP00000380068 | ||
- | | | + | | 12 |
- | | | + | | 6643985 |
+ | | 6647535 | ||
+ | | + | ||
| align="left"| Glyceraldehyde-3-phosphate dehydrogenase | | align="left"| Glyceraldehyde-3-phosphate dehydrogenase | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000156208 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000156208 HIP000156208.1] |
| SV | | SV | ||
| ENSP00000448039 | | ENSP00000448039 | ||
- | | | + | | 8 |
- | | | + | | 102381000 |
+ | | 102382292 | ||
+ | | + | ||
| align="left"| Similar to Nascent polypeptide-associated complex subunit alpha | | align="left"| Similar to Nascent polypeptide-associated complex subunit alpha | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000094486 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000094486 HIP000094486.1] |
| SV | | SV | ||
| ENSP00000434657 | | ENSP00000434657 | ||
- | | | + | | 11 |
- | | | + | | 75276140 |
+ | | 75278337 | ||
+ | | + | ||
| align="left"| Similar to Serpin H1 | | align="left"| Similar to Serpin H1 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000079628 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000079628 HIP000079628.1] |
| SV | | SV | ||
| ENSP00000295470 | | ENSP00000295470 | ||
- | | | + | | 4 |
- | | | + | | 83345781 |
+ | | 83350477 | ||
+ | | - | ||
| align="left"| Similar to Heterogeneous nuclear ribonucleoprotein D-like | | align="left"| Similar to Heterogeneous nuclear ribonucleoprotein D-like | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000146458 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000146458 HIP000146458.1] |
| SV | | SV | ||
| ENSP00000229239 | | ENSP00000229239 | ||
- | | | + | | 12 |
- | | | + | | 6643975 |
+ | | 6647419 | ||
+ | | + | ||
| align="left"| Glyceraldehyde-3-phosphate dehydrogenase | | align="left"| Glyceraldehyde-3-phosphate dehydrogenase | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000254793 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000254793 HIP000254793.1] |
| SV | | SV | ||
| ENSP00000333667 | | ENSP00000333667 | ||
- | | | + | | 12 |
- | | | + | | 57623494 |
+ | | 57628248 | ||
+ | | + | ||
| align="left"| Serine hydroxymethyltransferase, mitochondrial isoform 3 | | align="left"| Serine hydroxymethyltransferase, mitochondrial isoform 3 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000082035 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000082035 HIP000082035.1] |
| SV | | SV | ||
| ENSP00000362329 | | ENSP00000362329 | ||
- | | | + | | 17 |
- | | | + | | 8706041 |
+ | | 8770994 | ||
+ | | - | ||
| align="left"| Similar to Inorganic pyrophosphatase | | align="left"| Similar to Inorganic pyrophosphatase | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000256952 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000256952 HIP000256952.1] |
| AP | | AP | ||
| ENSP00000264998 | | ENSP00000264998 | ||
- | | | + | | 3 |
- | | | + | | 133465237 |
+ | | 133497635 | ||
+ | | + | ||
| align="left"| Serotransferrin precursor | | align="left"| Serotransferrin precursor | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000112393 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000112393 HIP000112393.1] |
| AP | | AP | ||
| ENSP00000419425 | | ENSP00000419425 | ||
- | | | + | | 7 |
- | | | + | | 44836279 |
+ | | 44841226 | ||
+ | | + | ||
| align="left"| Peptidyl-prolyl cis-trans isomerase A | | align="left"| Peptidyl-prolyl cis-trans isomerase A | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000192016 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000192016 HIP000192016.1] |
| AP | | AP | ||
| ENSP00000280326 | | ENSP00000280326 | ||
- | | | + | | 5 |
- | | | + | | 10250392 |
+ | | 10265190 | ||
+ | | + | ||
| align="left"| T-complex protein 1 subunit epsilon | | align="left"| T-complex protein 1 subunit epsilon | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000195327 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000195327 HIP000195327.1] |
| AP | | AP | ||
| ENSP00000234590 | | ENSP00000234590 | ||
- | | | + | | 1 |
- | | | + | | 8923173 |
+ | | 8939151 | ||
+ | | - | ||
| align="left"| Similar to enolase 1 | | align="left"| Similar to enolase 1 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000021875 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000021875 HIP000021875.1] |
| NOV | | NOV | ||
- | | | + | | — |
- | | | + | | 6 |
- | | | + | | 90556309 |
+ | | 90584148 | ||
+ | | + | ||
| align="left"| CASP8-associated protein 2 | | align="left"| CASP8-associated protein 2 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000040439 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000040439 HIP000040439.1] |
| NOV | | NOV | ||
- | | | + | | — |
- | | | + | | 14 |
- | | | + | | 73957670 |
+ | | 73960098 | ||
+ | | + | ||
| align="left"| Lysine-specific demethylase NO66 | | align="left"| Lysine-specific demethylase NO66 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000207747 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000207747 HIP000207747.1] |
| NOV | | NOV | ||
- | | | + | | — |
- | | | + | | 22 |
- | | | + | | 39898367 |
+ | | 39911775 | ||
+ | | + | ||
| align="left"| Uncharacterized protein | | align="left"| Uncharacterized protein | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000089530 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000089530 HIP000089530.1] |
| NOV | | NOV | ||
- | | | + | | — |
- | | | + | | 7 |
- | | | + | | 75616301 |
+ | | 75623934 | ||
+ | | - | ||
| align="left"| Similar to Transmembrane protein 120A | | align="left"| Similar to Transmembrane protein 120A | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000089527 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000089527 HIP000089527.1] |
| NOV | | NOV | ||
- | | | + | | — |
- | | | + | | 7 |
- | | | + | | 75616302 |
+ | | 75623977 | ||
+ | | - | ||
| align="left"| Transmembrane protein 120A. | | align="left"| Transmembrane protein 120A. | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000146783 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000146783 HIP000146783.1] |
| NOV | | NOV | ||
- | | | + | | — |
- | | | + | | 4 |
- | | | + | | 190394301 |
- | | align="left"| Similar to | + | | 190396344 |
+ | | + | ||
+ | | align="left"| Similar to Uncharacterized protein | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000055517 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000055517 HIP000055517.1] |
| NOV | | NOV | ||
- | | | + | | — |
- | | | + | | X |
- | | | + | | 56755685 |
+ | | 56845615 | ||
+ | | + | ||
| align="left"| Hypothetical short protein | | align="left"| Hypothetical short protein | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000100288 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000100288 HIP000100288.1] |
| NOV | | NOV | ||
- | | | + | | — |
- | | | + | | 20 |
- | | | + | | 10394177 |
+ | | 10401408 | ||
+ | | - | ||
| align="left"| Hypothetical short protein | | align="left"| Hypothetical short protein | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000036859 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000036859 HIP000036859.1] |
| NOV | | NOV | ||
- | | | + | | — |
- | | | + | | 16 |
- | | | + | | 4838457 |
+ | | 4846282 | ||
+ | | + | ||
| align="left"| Similar to RGD1563547 | | align="left"| Similar to RGD1563547 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000096511 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000096511 HIP000096511.1] |
| RET | | RET | ||
| ENSP00000342940 | | ENSP00000342940 | ||
- | | | + | | 5 |
- | | | + | | 77656408 |
+ | | 77772310 | ||
+ | | + | ||
| align="left"| Secretory carrier-associated membrane protein 1 | | align="left"| Secretory carrier-associated membrane protein 1 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000111969 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000111969 HIP000111969.1] |
| RET | | RET | ||
| ENSP00000423281 | | ENSP00000423281 | ||
- | | | + | | 1 |
- | | | + | | 145096428 |
+ | | 145116582 | ||
+ | | + | ||
| align="left"| Similar to Vesicle-trafficking protein SEC22b | | align="left"| Similar to Vesicle-trafficking protein SEC22b | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000109009 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000109009 HIP000109009.1] |
| RET | | RET | ||
| ENSP00000279839 | | ENSP00000279839 | ||
- | | | + | | 11 |
- | | | + | | 94696512 |
+ | | 94706716 | ||
+ | | - | ||
| align="left"| Protein CWC15 homolog. | | align="left"| Protein CWC15 homolog. | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000044400 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000044400 HIP000044400.1] |
| RET | | RET | ||
| ENSP00000381644 | | ENSP00000381644 | ||
- | | | + | | 3 |
- | | | + | | 53321387 |
+ | | 53381637 | ||
+ | | - | ||
| align="left"| MRNA-decapping enzyme 1A. | | align="left"| MRNA-decapping enzyme 1A. | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000024206 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000024206 HIP000024206.1] |
| RET | | RET | ||
| ENSP00000300793 | | ENSP00000300793 | ||
- | | | + | | 11 |
- | | | + | | 118938491 |
+ | | 118952681 | ||
+ | | + | ||
| align="left"| Similar to Vacuolar protein sorting-associated protein 11 homolog | | align="left"| Similar to Vacuolar protein sorting-associated protein 11 homolog | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000096222 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000096222 HIP000096222.1] |
| RET | | RET | ||
| ENSP00000399565 | | ENSP00000399565 | ||
- | | | + | | 11 |
- | | | + | | 94800156 |
+ | | 94802666 | ||
+ | | + | ||
| align="left"| Serine/arginine-rich splicing factor 8 | | align="left"| Serine/arginine-rich splicing factor 8 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000040949 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000040949 HIP000040949.1] |
| RET | | RET | ||
| ENSP00000299933 | | ENSP00000299933 | ||
- | | | + | | 19 |
- | | | + | | 58816743 |
+ | | 58827018 | ||
+ | | + | ||
| align="left"| Hypothetical protein. | | align="left"| Hypothetical protein. | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000096114 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000096114 HIP000096114.1] |
| RET | | RET | ||
| ENSP00000368753 | | ENSP00000368753 | ||
- | | | + | | 8 |
- | | | + | | 64081202 |
+ | | 64123304 | ||
+ | | + | ||
| align="left"| Similar to YTH domain family protein 3 | | align="left"| Similar to YTH domain family protein 3 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000111969 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000111969 HIP000111969.1] |
| RET | | RET | ||
| ENSP00000423281 | | ENSP00000423281 | ||
- | | | + | | 1 |
- | | | + | | 145096428 |
+ | | 145116582 | ||
+ | | + | ||
| align="left"| Similar to Vesicle-trafficking protein SEC22b | | align="left"| Similar to Vesicle-trafficking protein SEC22b | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000112061 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000112061 HIP000112061.1] |
| RET | | RET | ||
| ENSP00000395088 | | ENSP00000395088 | ||
- | | | + | | 3 |
- | | | + | | 196669545 |
+ | | 196670884 | ||
+ | | + | ||
| align="left"| Hypothetical protein. | | align="left"| Hypothetical protein. | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000023279 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000023279 HIP000023279.1] |
| RET | | RET | ||
| ENSP00000339048 | | ENSP00000339048 | ||
- | | | + | | 11 |
- | | | + | | 118895065 |
+ | | 118901419 | ||
+ | | - | ||
| align="left"| Glucose-6-phosphate translocase isoform 1 | | align="left"| Glucose-6-phosphate translocase isoform 1 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000095666 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000095666 HIP000095666.1] |
| RET | | RET | ||
| ENSP00000276681 | | ENSP00000276681 | ||
- | | | + | | 8 |
- | | | + | | 120220633 |
+ | | 120257912 | ||
+ | | + | ||
| align="left"| Protein MAL2 | | align="left"| Protein MAL2 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000055346 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000055346 HIP000055346.1] |
| RET | | RET | ||
| ENSP00000369988 | | ENSP00000369988 | ||
- | | | + | | 19 |
- | | | + | | 10736229 |
+ | | 10755232 | ||
+ | | + | ||
| align="left"| Choline transporter-like protein 2 | | align="left"| Choline transporter-like protein 2 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000049979 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000049979 HIP000049979.1] |
| RET | | RET | ||
| ENSP00000301323 | | ENSP00000301323 | ||
- | | | + | | 8 |
- | | | + | | 145736814 |
+ | | 145743168 | ||
+ | | - | ||
| align="left"| ATP-dependent DNA helicase Q4 | | align="left"| ATP-dependent DNA helicase Q4 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000024207 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000024207 HIP000024207.1] |
| RET | | RET | ||
| ENSP00000300793 | | ENSP00000300793 | ||
- | | | + | | 11 |
- | | | + | | 118938493 |
+ | | 118952675 | ||
+ | | + | ||
| align="left"| Vacuolar protein sorting-associated protein 11 homolog | | align="left"| Vacuolar protein sorting-associated protein 11 homolog | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000060730 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000060730 HIP000060730.1] |
| RET | | RET | ||
| ENSP00000412071 | | ENSP00000412071 | ||
- | | | + | | 8 |
- | | | + | | 145106176 |
+ | | 145114935 | ||
+ | | - | ||
| align="left"| 5-oxoprolinase | | align="left"| 5-oxoprolinase | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000078193 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000078193 HIP000078193.1] |
| RET | | RET | ||
| ENSP00000320510 | | ENSP00000320510 | ||
- | | | + | | 17 |
- | | | + | | 48212696 |
+ | | 48227874 | ||
+ | | - | ||
| align="left"| Neurabin-2 | | align="left"| Neurabin-2 | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000256952 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000256952 HIP000256952.1] |
| RET | | RET | ||
| ENSP00000264998 | | ENSP00000264998 | ||
- | | | + | | 3 |
- | | | + | | 133465237 |
+ | | 133497635 | ||
+ | | + | ||
| align="left"| Serotransferrin precursor | | align="left"| Serotransferrin precursor | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000112393 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000112393 HIP000112393.1] |
| RET | | RET | ||
| ENSP00000419425 | | ENSP00000419425 | ||
- | | | + | | 7 |
- | | | + | | 44836279 |
+ | | 44841226 | ||
+ | | + | ||
| align="left"| Peptidyl-prolyl cis-trans isomerase A | | align="left"| Peptidyl-prolyl cis-trans isomerase A | ||
|- align="center" | |- align="center" | ||
- | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000192016 | + | | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000192016 HIP000192016.1] |
| RET | | RET | ||
| ENSP00000280326 | | ENSP00000280326 | ||
- | | | + | | 5 |
- | | | + | | 10250392 |
+ | | 10265190 | ||
+ | | + | ||
| align="left"| T-complex protein 1 subunit epsilon | | align="left"| T-complex protein 1 subunit epsilon | ||
|} | |} | ||
+ | |||
+ | where the "Type" column abbreviations are as follows: | ||
+ | # HV - haplotype variant; | ||
+ | # IG - immunoglobulin variant; | ||
+ | # SV - alternate splice variant; | ||
+ | # AP - amino acid polymorphism; | ||
+ | # NOV - novel protein (never been in ENSEMBL); and | ||
+ | # RET - protein is currently "retired" from ENSEMBL. |
HS PLUS is a collection of human protein sequences to be used in addition to the ENSEMBL collection protein sequences.
Accession | Type | Example SV | Chr | Start | End | Strand | Description |
---|---|---|---|---|---|---|---|
HIP000257735.1 | HV | — | 6_apd_hap1 | 3098081 | 3100314 | + | Heat shock 70 kDa protein 1A/1B |
HIP000046027.1 | IG-C | — | 14 | 106207685 | 106725733 | - | Ig gamma-1 chain C region |
HIP000046082.1 | IG-C | — | 14 | 106202680 | 106791519 | - | Similar to Ig gamma-1 chain C region |
HIP000046058.1 | IG-H | — | — | — | — | Ig heavy variable | |
HIP000147131.1 | IG-L | — | 22 | 22735202 | 23248967 | + | Similar to Ig lambda-2 chain C regions |
HIP000025842.1 | SV | ENSP00000262710 | 14 | 23527776 | 23564332 | - | Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5. |
HIP000210721.1 | SV | ENSP00000369528 | 10 | 5807192 | 5811376 | - | Similar to Rab GDP dissociation inhibitor beta |
HIP000104615.1 | SV | ENSP00000341168 | 5 | 170818369 | 170837886 | + | Similar to Nucleophosmin |
HIP000022213.1 | SV | ENSP00000456022 | 16 | 69404113 | 69419874 | - | Similar to Telomeric repeat-binding factor 2 |
HIP000022571.1 | SV | ENSP00000300408 | 17 | 47482353 | 47490627 | - | Prohibitin |
HIP000057656.1 | SV | ENSP00000380068 | 12 | 6643985 | 6647535 | + | Glyceraldehyde-3-phosphate dehydrogenase |
HIP000156208.1 | SV | ENSP00000448039 | 8 | 102381000 | 102382292 | + | Similar to Nascent polypeptide-associated complex subunit alpha |
HIP000094486.1 | SV | ENSP00000434657 | 11 | 75276140 | 75278337 | + | Similar to Serpin H1 |
HIP000079628.1 | SV | ENSP00000295470 | 4 | 83345781 | 83350477 | - | Similar to Heterogeneous nuclear ribonucleoprotein D-like |
HIP000146458.1 | SV | ENSP00000229239 | 12 | 6643975 | 6647419 | + | Glyceraldehyde-3-phosphate dehydrogenase |
HIP000254793.1 | SV | ENSP00000333667 | 12 | 57623494 | 57628248 | + | Serine hydroxymethyltransferase, mitochondrial isoform 3 |
HIP000082035.1 | SV | ENSP00000362329 | 17 | 8706041 | 8770994 | - | Similar to Inorganic pyrophosphatase |
HIP000256952.1 | AP | ENSP00000264998 | 3 | 133465237 | 133497635 | + | Serotransferrin precursor |
HIP000112393.1 | AP | ENSP00000419425 | 7 | 44836279 | 44841226 | + | Peptidyl-prolyl cis-trans isomerase A |
HIP000192016.1 | AP | ENSP00000280326 | 5 | 10250392 | 10265190 | + | T-complex protein 1 subunit epsilon |
HIP000195327.1 | AP | ENSP00000234590 | 1 | 8923173 | 8939151 | - | Similar to enolase 1 |
HIP000021875.1 | NOV | — | 6 | 90556309 | 90584148 | + | CASP8-associated protein 2 |
HIP000040439.1 | NOV | — | 14 | 73957670 | 73960098 | + | Lysine-specific demethylase NO66 |
HIP000207747.1 | NOV | — | 22 | 39898367 | 39911775 | + | Uncharacterized protein |
HIP000089530.1 | NOV | — | 7 | 75616301 | 75623934 | - | Similar to Transmembrane protein 120A |
HIP000089527.1 | NOV | — | 7 | 75616302 | 75623977 | - | Transmembrane protein 120A. |
HIP000146783.1 | NOV | — | 4 | 190394301 | 190396344 | + | Similar to Uncharacterized protein |
HIP000055517.1 | NOV | — | X | 56755685 | 56845615 | + | Hypothetical short protein |
HIP000100288.1 | NOV | — | 20 | 10394177 | 10401408 | - | Hypothetical short protein |
HIP000036859.1 | NOV | — | 16 | 4838457 | 4846282 | + | Similar to RGD1563547 |
HIP000096511.1 | RET | ENSP00000342940 | 5 | 77656408 | 77772310 | + | Secretory carrier-associated membrane protein 1 |
HIP000111969.1 | RET | ENSP00000423281 | 1 | 145096428 | 145116582 | + | Similar to Vesicle-trafficking protein SEC22b |
HIP000109009.1 | RET | ENSP00000279839 | 11 | 94696512 | 94706716 | - | Protein CWC15 homolog. |
HIP000044400.1 | RET | ENSP00000381644 | 3 | 53321387 | 53381637 | - | MRNA-decapping enzyme 1A. |
HIP000024206.1 | RET | ENSP00000300793 | 11 | 118938491 | 118952681 | + | Similar to Vacuolar protein sorting-associated protein 11 homolog |
HIP000096222.1 | RET | ENSP00000399565 | 11 | 94800156 | 94802666 | + | Serine/arginine-rich splicing factor 8 |
HIP000040949.1 | RET | ENSP00000299933 | 19 | 58816743 | 58827018 | + | Hypothetical protein. |
HIP000096114.1 | RET | ENSP00000368753 | 8 | 64081202 | 64123304 | + | Similar to YTH domain family protein 3 |
HIP000111969.1 | RET | ENSP00000423281 | 1 | 145096428 | 145116582 | + | Similar to Vesicle-trafficking protein SEC22b |
HIP000112061.1 | RET | ENSP00000395088 | 3 | 196669545 | 196670884 | + | Hypothetical protein. |
HIP000023279.1 | RET | ENSP00000339048 | 11 | 118895065 | 118901419 | - | Glucose-6-phosphate translocase isoform 1 |
HIP000095666.1 | RET | ENSP00000276681 | 8 | 120220633 | 120257912 | + | Protein MAL2 |
HIP000055346.1 | RET | ENSP00000369988 | 19 | 10736229 | 10755232 | + | Choline transporter-like protein 2 |
HIP000049979.1 | RET | ENSP00000301323 | 8 | 145736814 | 145743168 | - | ATP-dependent DNA helicase Q4 |
HIP000024207.1 | RET | ENSP00000300793 | 11 | 118938493 | 118952675 | + | Vacuolar protein sorting-associated protein 11 homolog |
HIP000060730.1 | RET | ENSP00000412071 | 8 | 145106176 | 145114935 | - | 5-oxoprolinase |
HIP000078193.1 | RET | ENSP00000320510 | 17 | 48212696 | 48227874 | - | Neurabin-2 |
HIP000256952.1 | RET | ENSP00000264998 | 3 | 133465237 | 133497635 | + | Serotransferrin precursor |
HIP000112393.1 | RET | ENSP00000419425 | 7 | 44836279 | 44841226 | + | Peptidyl-prolyl cis-trans isomerase A |
HIP000192016.1 | RET | ENSP00000280326 | 5 | 10250392 | 10265190 | + | T-complex protein 1 subunit epsilon |
where the "Type" column abbreviations are as follows: