Hs plus

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Line 8: Line 8:
! Example SV
! Example SV
! Chr
! Chr
-
! Start
+
! Coordinates
! align="left"| Description
! align="left"| Description
|- align="center"
|- align="center"
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| HV
| HV
| -
| -
-
|  
+
| 6_apd_hap1
-
|
+
| 3098081-3100314(+)
| align="left"| Heat shock 70 kDa protein 1A/1B
| align="left"| Heat shock 70 kDa protein 1A/1B
|- align="center"
|- align="center"
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| IG-C
| IG-C
| -
| -
-
|  
+
| 14
-
|
+
| 106207685-106725733(-)
| align="left"| Ig gamma-1 chain C region
| align="left"| Ig gamma-1 chain C region
|- align="center"
|- align="center"
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| IG-C
| IG-C
| -   
| -   
-
|  
+
| 14
-
|
+
| 106202680-106791519(-)
| align="left"| Similar to Ig gamma-1 chain C region
| align="left"| Similar to Ig gamma-1 chain C region
|- align="center"
|- align="center"
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| IG-L
| IG-L
| -
| -
-
|  
+
| 22
-
|
+
| 22735202-23248967(+)
| align="left"| Similar to Ig lambda-2 chain C regions
| align="left"| Similar to Ig lambda-2 chain C regions
|- align="center"
|- align="center"
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| SV
| SV
| ENSP00000262710
| ENSP00000262710
-
|  
+
| 14
-
|
+
| 23527776-23564332(-)
| align="left"| Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5.
| align="left"| Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5.
|- align="center"
|- align="center"
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| SV
| SV
| ENSP00000369528
| ENSP00000369528
-
|  
+
| 10
-
|
+
| 5807192-5811376(-)
| align="left"| Similar to Rab GDP dissociation inhibitor beta
| align="left"| Similar to Rab GDP dissociation inhibitor beta
|- align="center"
|- align="center"
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| SV
| SV
| ENSP00000341168
| ENSP00000341168
-
|  
+
| 5
-
|
+
| 170818369-170837886(+)
| align="left"| Similar to Nucleophosmin
| align="left"| Similar to Nucleophosmin
|- align="center"
|- align="center"
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| SV
| SV
| ENSP00000456022
| ENSP00000456022
-
|  
+
| 16
-
|
+
| 69404113-69419874(-)
| align="left"| Similar to Telomeric repeat-binding factor 2
| align="left"| Similar to Telomeric repeat-binding factor 2
|- align="center"
|- align="center"
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| SV
| SV
| ENSP00000300408
| ENSP00000300408
-
|  
+
| 17
-
|
+
| 47482353-47490627(-)
| align="left"| Prohibitin
| align="left"| Prohibitin
|- align="center"
|- align="center"
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| SV
| SV
| ENSP00000380068
| ENSP00000380068
-
|  
+
| 12
-
|
+
| 6643985-6647535(+)
| align="left"| Glyceraldehyde-3-phosphate dehydrogenase
| align="left"| Glyceraldehyde-3-phosphate dehydrogenase
|- align="center"
|- align="center"
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| SV
| SV
| ENSP00000448039
| ENSP00000448039
-
|  
+
| 8
-
|
+
| 102381000-102382292(+)
| align="left"| Similar to Nascent polypeptide-associated complex subunit alpha
| align="left"| Similar to Nascent polypeptide-associated complex subunit alpha
|- align="center"
|- align="center"
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| SV
| SV
| ENSP00000434657
| ENSP00000434657
-
|  
+
| 11
-
|
+
| 75276140-75278337(+)
| align="left"| Similar to Serpin H1
| align="left"| Similar to Serpin H1
|- align="center"
|- align="center"

Revision as of 14:40, 31 January 2013

HS PLUS is a collection of human protein sequences to be used in addition to the ENSEMBL collection protein sequences.

Accessions

Accession Type Example SV Chr Coordinates Description
HIP000257735.1 HV - 6_apd_hap1 3098081-3100314(+) Heat shock 70 kDa protein 1A/1B
HIP000046027.1 IG-C - 14 106207685-106725733(-) Ig gamma-1 chain C region
HIP000046082.1 IG-C - 14 106202680-106791519(-) Similar to Ig gamma-1 chain C region
HIP000046058.1 IG-H - Ig heavy variable
HIP000147131.1 IG-L - 22 22735202-23248967(+) Similar to Ig lambda-2 chain C regions
HIP000025842.1 SV ENSP00000262710 14 23527776-23564332(-) Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5.
HIP000210721.1 SV ENSP00000369528 10 5807192-5811376(-) Similar to Rab GDP dissociation inhibitor beta
HIP000104615.1 SV ENSP00000341168 5 170818369-170837886(+) Similar to Nucleophosmin
HIP000022213.1 SV ENSP00000456022 16 69404113-69419874(-) Similar to Telomeric repeat-binding factor 2
HIP000022571.1 SV ENSP00000300408 17 47482353-47490627(-) Prohibitin
HIP000057656.1 SV ENSP00000380068 12 6643985-6647535(+) Glyceraldehyde-3-phosphate dehydrogenase
HIP000156208.1 SV ENSP00000448039 8 102381000-102382292(+) Similar to Nascent polypeptide-associated complex subunit alpha
HIP000094486.1 SV ENSP00000434657 11 75276140-75278337(+) Similar to Serpin H1
HIP000079628.1 SV ENSP00000295470 Similar to Heterogeneous nuclear ribonucleoprotein D-like
HIP000146458.1 SV ENSP00000229239 Glyceraldehyde-3-phosphate dehydrogenase
HIP000254793.1 SV ENSP00000333667 Serine hydroxymethyltransferase, mitochondrial isoform 3
HIP000082035.1 SV ENSP00000362329 Similar to Inorganic pyrophosphatase
HIP000256952.1 AP ENSP00000264998 Serotransferrin precursor
HIP000112393.1 AP ENSP00000419425 Peptidyl-prolyl cis-trans isomerase A
HIP000192016.1 AP ENSP00000280326 T-complex protein 1 subunit epsilon
HIP000195327.1 AP ENSP00000234590 Similar to enolase 1
HIP000021875.1 NOV - CASP8-associated protein 2
HIP000040439.1 NOV - Lysine-specific demethylase NO66
HIP000207747.1 NOV - Uncharacterized protein
HIP000089530.1 NOV - Similar to Transmembrane protein 120A
HIP000089527.1 NOV - Transmembrane protein 120A.
HIP000146783.1 NOV - Similar to Adenosine deaminase acting on RNA 1-A
HIP000055517.1 NOV - Hypothetical short protein
HIP000100288.1 NOV - Hypothetical short protein
HIP000036859.1 NOV - Similar to RGD1563547
HIP000096511.1 RET ENSP00000342940 Secretory carrier-associated membrane protein 1
HIP000111969.1 RET ENSP00000423281 Similar to Vesicle-trafficking protein SEC22b
HIP000109009.1 RET ENSP00000279839 Protein CWC15 homolog.
HIP000044400.1 RET ENSP00000381644 MRNA-decapping enzyme 1A.
HIP000024206.1 RET ENSP00000300793 Similar to Vacuolar protein sorting-associated protein 11 homolog
HIP000096222.1 RET ENSP00000399565 Serine/arginine-rich splicing factor 8
HIP000040949.1 RET ENSP00000299933 Hypothetical protein.
HIP000096114.1 RET ENSP00000368753 Similar to YTH domain family protein 3
HIP000111969.1 RET ENSP00000423281 Similar to Vesicle-trafficking protein SEC22b
HIP000112061.1 RET ENSP00000395088 Hypothetical protein.
HIP000023279.1 RET ENSP00000339048 Glucose-6-phosphate translocase isoform 1
HIP000095666.1 RET ENSP00000276681 Protein MAL2
HIP000055346.1 RET ENSP00000369988 Choline transporter-like protein 2
HIP000049979.1 RET ENSP00000301323 ATP-dependent DNA helicase Q4
HIP000024207.1 RET ENSP00000300793 Vacuolar protein sorting-associated protein 11 homolog
HIP000060730.1 RET ENSP00000412071 5-oxoprolinase
HIP000078193.1 RET ENSP00000320510 Neurabin-2
HIP000256952.1 RET ENSP00000264998 Serotransferrin precursor
HIP000112393.1 RET ENSP00000419425 Peptidyl-prolyl cis-trans isomerase A
HIP000192016.1 RET ENSP00000280326 T-complex protein 1 subunit epsilon
Retrieved from "http://wiki.thegpm.org/wiki/Hs_plus"
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