Hs plus

From TheGPMWiki
(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
==Accessions==
==Accessions==
-
{| class="wikitable"
+
{| class="wikitable sortable"
! Accession
! Accession
! Type
! Type
Line 238: Line 238:
| RET
| RET
| ENSP00000279839  
| ENSP00000279839  
-
|  
+
| 11
-
|
+
| 94696512-94706716(-)
| align="left"| Protein CWC15 homolog.
| align="left"| Protein CWC15 homolog.
|- align="center"
|- align="center"
Line 245: Line 245:
| RET
| RET
| ENSP00000381644  
| ENSP00000381644  
-
|  
+
| 3
-
|
+
| 53321387-53381637(-)
| align="left"| MRNA-decapping enzyme 1A.
| align="left"| MRNA-decapping enzyme 1A.
|- align="center"
|- align="center"
Line 252: Line 252:
| RET
| RET
| ENSP00000300793   
| ENSP00000300793   
-
|  
+
| 11
-
|
+
| 118938491-118952681(+)
| align="left"| Similar to Vacuolar protein sorting-associated protein 11 homolog
| align="left"| Similar to Vacuolar protein sorting-associated protein 11 homolog
|- align="center"
|- align="center"
Line 259: Line 259:
| RET
| RET
| ENSP00000399565  
| ENSP00000399565  
-
|  
+
| 11
-
|
+
| 94800156-94802666(+)
| align="left"| Serine/arginine-rich splicing factor 8
| align="left"| Serine/arginine-rich splicing factor 8
|- align="center"
|- align="center"
Line 266: Line 266:
| RET
| RET
| ENSP00000299933
| ENSP00000299933
-
|  
+
| 19
-
|
+
| 58816743-58827018(+)
| align="left"| Hypothetical protein.
| align="left"| Hypothetical protein.
|- align="center"
|- align="center"
Line 273: Line 273:
| RET
| RET
| ENSP00000368753
| ENSP00000368753
-
|  
+
| 8
-
|
+
| 64081202-64123304(+)
| align="left"| Similar to YTH domain family protein 3
| align="left"| Similar to YTH domain family protein 3
|- align="center"
|- align="center"
Line 280: Line 280:
| RET
| RET
| ENSP00000423281
| ENSP00000423281
-
|  
+
| 1
-
|
+
| 145096428-145116582(+)
| align="left"| Similar to Vesicle-trafficking protein SEC22b
| align="left"| Similar to Vesicle-trafficking protein SEC22b
|- align="center"
|- align="center"
Line 287: Line 287:
| RET
| RET
| ENSP00000395088
| ENSP00000395088
-
|  
+
| 3
-
|
+
| 196669545-196670884(+)
| align="left"| Hypothetical protein.
| align="left"| Hypothetical protein.
|- align="center"
|- align="center"
Line 294: Line 294:
| RET
| RET
| ENSP00000339048
| ENSP00000339048
-
|  
+
| 11
-
|
+
| 118895065-118901419(-)
| align="left"| Glucose-6-phosphate translocase isoform 1
| align="left"| Glucose-6-phosphate translocase isoform 1
|- align="center"
|- align="center"
Line 301: Line 301:
| RET
| RET
| ENSP00000276681  
| ENSP00000276681  
-
|  
+
| 8
-
|
+
| 120220633-120257912(+)
| align="left"| Protein MAL2
| align="left"| Protein MAL2
|- align="center"
|- align="center"
Line 308: Line 308:
| RET
| RET
| ENSP00000369988
| ENSP00000369988
-
|  
+
| 19
-
|
+
| 10736229-10755232(+)
| align="left"| Choline transporter-like protein 2
| align="left"| Choline transporter-like protein 2
|- align="center"
|- align="center"
Line 315: Line 315:
| RET
| RET
| ENSP00000301323
| ENSP00000301323
-
|  
+
| 8
-
|
+
| 145736814-145743168(-)
| align="left"| ATP-dependent DNA helicase Q4
| align="left"| ATP-dependent DNA helicase Q4
|- align="center"
|- align="center"
Line 322: Line 322:
| RET
| RET
| ENSP00000300793
| ENSP00000300793
-
|  
+
| 11
-
|
+
| 118938493-118952675(+)
| align="left"| Vacuolar protein sorting-associated protein 11 homolog
| align="left"| Vacuolar protein sorting-associated protein 11 homolog
|- align="center"
|- align="center"
Line 329: Line 329:
| RET
| RET
| ENSP00000412071
| ENSP00000412071
-
|  
+
| 8
-
|
+
| 145106176-145114935(-)
| align="left"| 5-oxoprolinase
| align="left"| 5-oxoprolinase
|- align="center"
|- align="center"
Line 336: Line 336:
| RET
| RET
| ENSP00000320510  
| ENSP00000320510  
-
|  
+
| 17
-
|
+
| 48212696-48227874(-)
| align="left"| Neurabin-2
| align="left"| Neurabin-2
|- align="center"
|- align="center"
Line 343: Line 343:
| RET
| RET
| ENSP00000264998
| ENSP00000264998
-
|  
+
| 3
-
|
+
| 133465237-133497635(+)
| align="left"| Serotransferrin precursor
| align="left"| Serotransferrin precursor
|- align="center"
|- align="center"
Line 350: Line 350:
| RET
| RET
| ENSP00000419425
| ENSP00000419425
-
|  
+
| 7
-
|
+
| 44836279-44841226(+)
| align="left"| Peptidyl-prolyl cis-trans isomerase A
| align="left"| Peptidyl-prolyl cis-trans isomerase A
|- align="center"
|- align="center"
Line 357: Line 357:
| RET
| RET
| ENSP00000280326
| ENSP00000280326
-
|  
+
| 5
-
|
+
| 10250392-10265190(+)
| align="left"| T-complex protein 1 subunit epsilon
| align="left"| T-complex protein 1 subunit epsilon
|}
|}

Revision as of 15:04, 31 January 2013

HS PLUS is a collection of human protein sequences to be used in addition to the ENSEMBL collection protein sequences.

Accessions

Accession Type Example SV Chr Coordinates Description
HIP000257735.1 HV - 6_apd_hap1 3098081-3100314(+) Heat shock 70 kDa protein 1A/1B
HIP000046027.1 IG-C - 14 106207685-106725733(-) Ig gamma-1 chain C region
HIP000046082.1 IG-C - 14 106202680-106791519(-) Similar to Ig gamma-1 chain C region
HIP000046058.1 IG-H - Ig heavy variable
HIP000147131.1 IG-L - 22 22735202-23248967(+) Similar to Ig lambda-2 chain C regions
HIP000025842.1 SV ENSP00000262710 14 23527776-23564332(-) Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5.
HIP000210721.1 SV ENSP00000369528 10 5807192-5811376(-) Similar to Rab GDP dissociation inhibitor beta
HIP000104615.1 SV ENSP00000341168 5 170818369-170837886(+) Similar to Nucleophosmin
HIP000022213.1 SV ENSP00000456022 16 69404113-69419874(-) Similar to Telomeric repeat-binding factor 2
HIP000022571.1 SV ENSP00000300408 17 47482353-47490627(-) Prohibitin
HIP000057656.1 SV ENSP00000380068 12 6643985-6647535(+) Glyceraldehyde-3-phosphate dehydrogenase
HIP000156208.1 SV ENSP00000448039 8 102381000-102382292(+) Similar to Nascent polypeptide-associated complex subunit alpha
HIP000094486.1 SV ENSP00000434657 11 75276140-75278337(+) Similar to Serpin H1
HIP000079628.1 SV ENSP00000295470 4 83345781-83350477(-) Similar to Heterogeneous nuclear ribonucleoprotein D-like
HIP000146458.1 SV ENSP00000229239 12 6643975-6647419(+) Glyceraldehyde-3-phosphate dehydrogenase
HIP000254793.1 SV ENSP00000333667 12 57623494-57628248(+) Serine hydroxymethyltransferase, mitochondrial isoform 3
HIP000082035.1 SV ENSP00000362329 17 8706041-8770994(-) Similar to Inorganic pyrophosphatase
HIP000256952.1 AP ENSP00000264998 22 22735202-23248967(+) Serotransferrin precursor
HIP000112393.1 AP ENSP00000419425 7 44836279-44841226(+) Peptidyl-prolyl cis-trans isomerase A
HIP000192016.1 AP ENSP00000280326 5 10250392-10265190(+) T-complex protein 1 subunit epsilon
HIP000195327.1 AP ENSP00000234590 1 8923173-8939151(-) Similar to enolase 1
HIP000021875.1 NOV - 6 90556309-90584148(+) CASP8-associated protein 2
HIP000040439.1 NOV - 14 73957670-73960098(+) Lysine-specific demethylase NO66
HIP000207747.1 NOV - 22 39898367-39911775(+) Uncharacterized protein
HIP000089530.1 NOV - 7 75616301-75623934(-) Similar to Transmembrane protein 120A
HIP000089527.1 NOV - 7 75616302-75623977(-) Transmembrane protein 120A.
HIP000146783.1 NOV - 4 190394301-190396344(+) Similar to Uncharacterized protein
HIP000055517.1 NOV - X 56755685-56845615(+) Hypothetical short protein
HIP000100288.1 NOV - 20 10394177-10401408(-) Hypothetical short protein
HIP000036859.1 NOV - 16 4838457-4846282(+) Similar to RGD1563547
HIP000096511.1 RET ENSP00000342940 5 77656408-77772310(+) Secretory carrier-associated membrane protein 1
HIP000111969.1 RET ENSP00000423281 1 145096428-145116582(+) Similar to Vesicle-trafficking protein SEC22b
HIP000109009.1 RET ENSP00000279839 11 94696512-94706716(-) Protein CWC15 homolog.
HIP000044400.1 RET ENSP00000381644 3 53321387-53381637(-) MRNA-decapping enzyme 1A.
HIP000024206.1 RET ENSP00000300793 11 118938491-118952681(+) Similar to Vacuolar protein sorting-associated protein 11 homolog
HIP000096222.1 RET ENSP00000399565 11 94800156-94802666(+) Serine/arginine-rich splicing factor 8
HIP000040949.1 RET ENSP00000299933 19 58816743-58827018(+) Hypothetical protein.
HIP000096114.1 RET ENSP00000368753 8 64081202-64123304(+) Similar to YTH domain family protein 3
HIP000111969.1 RET ENSP00000423281 1 145096428-145116582(+) Similar to Vesicle-trafficking protein SEC22b
HIP000112061.1 RET ENSP00000395088 3 196669545-196670884(+) Hypothetical protein.
HIP000023279.1 RET ENSP00000339048 11 118895065-118901419(-) Glucose-6-phosphate translocase isoform 1
HIP000095666.1 RET ENSP00000276681 8 120220633-120257912(+) Protein MAL2
HIP000055346.1 RET ENSP00000369988 19 10736229-10755232(+) Choline transporter-like protein 2
HIP000049979.1 RET ENSP00000301323 8 145736814-145743168(-) ATP-dependent DNA helicase Q4
HIP000024207.1 RET ENSP00000300793 11 118938493-118952675(+) Vacuolar protein sorting-associated protein 11 homolog
HIP000060730.1 RET ENSP00000412071 8 145106176-145114935(-) 5-oxoprolinase
HIP000078193.1 RET ENSP00000320510 17 48212696-48227874(-) Neurabin-2
HIP000256952.1 RET ENSP00000264998 3 133465237-133497635(+) Serotransferrin precursor
HIP000112393.1 RET ENSP00000419425 7 44836279-44841226(+) Peptidyl-prolyl cis-trans isomerase A
HIP000192016.1 RET ENSP00000280326 5 10250392-10265190(+) T-complex protein 1 subunit epsilon
Personal tools