Hs plus

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Line 8: Line 8:
! Example SV
! Example SV
! Chr
! Chr
-
! Coordinates
+
! Start
 +
! End
 +
! Str
! align="left"| Description
! align="left"| Description
|- align="center"
|- align="center"
Line 15: Line 17:
| -
| -
| 6_apd_hap1
| 6_apd_hap1
-
| 3098081-3100314(+)
+
| 3098081-3100314
 +
| +
| align="left"| Heat shock 70 kDa protein 1A/1B
| align="left"| Heat shock 70 kDa protein 1A/1B
|- align="center"
|- align="center"
Line 22: Line 25:
| -
| -
| 14
| 14
-
| 106207685-106725733(-)
+
| 106207685
 +
| 106725733
 +
| -
| align="left"| Ig gamma-1 chain C region
| align="left"| Ig gamma-1 chain C region
|- align="center"
|- align="center"
Line 29: Line 34:
| -   
| -   
| 14
| 14
-
| 106202680-106791519(-)
+
| 106202680
 +
| 106791519
 +
| -
| align="left"| Similar to Ig gamma-1 chain C region
| align="left"| Similar to Ig gamma-1 chain C region
|- align="center"
|- align="center"
Line 35: Line 42:
| IG-H
| IG-H
| -
| -
-
|  
+
| na
 +
| na
|   
|   
| align="left"| Ig heavy variable
| align="left"| Ig heavy variable
Line 43: Line 51:
| -
| -
| 22
| 22
-
| 22735202-23248967(+)
+
| 22735202
 +
| 23248967
 +
| +
| align="left"| Similar to Ig lambda-2 chain C regions
| align="left"| Similar to Ig lambda-2 chain C regions
|- align="center"
|- align="center"
Line 50: Line 60:
| ENSP00000262710
| ENSP00000262710
| 14
| 14
-
| 23527776-23564332(-)
+
| 23527776
 +
| 23564332
 +
| -
| align="left"| Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5.
| align="left"| Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5.
|- align="center"
|- align="center"
Line 57: Line 69:
| ENSP00000369528
| ENSP00000369528
| 10
| 10
-
| 5807192-5811376(-)
+
| 5807192
 +
| 5811376
 +
| -  
| align="left"| Similar to Rab GDP dissociation inhibitor beta
| align="left"| Similar to Rab GDP dissociation inhibitor beta
|- align="center"
|- align="center"
Line 64: Line 78:
| ENSP00000341168
| ENSP00000341168
| 5
| 5
-
| 170818369-170837886(+)
+
| 170818369
 +
| 170837886
 +
| +  
| align="left"| Similar to Nucleophosmin
| align="left"| Similar to Nucleophosmin
|- align="center"
|- align="center"
Line 71: Line 87:
| ENSP00000456022
| ENSP00000456022
| 16
| 16
-
| 69404113-69419874(-)
+
| 69404113
 +
| 69419874
 +
| -  
| align="left"| Similar to Telomeric repeat-binding factor 2
| align="left"| Similar to Telomeric repeat-binding factor 2
|- align="center"
|- align="center"
Line 78: Line 96:
| ENSP00000300408
| ENSP00000300408
| 17
| 17
-
| 47482353-47490627(-)
+
| 47482353
 +
| 47490627
 +
| -  
| align="left"| Prohibitin
| align="left"| Prohibitin
|- align="center"
|- align="center"
Line 85: Line 105:
| ENSP00000380068
| ENSP00000380068
| 12
| 12
-
| 6643985-6647535(+)
+
| 6643985
 +
| 6647535
 +
| +
| align="left"| Glyceraldehyde-3-phosphate dehydrogenase
| align="left"| Glyceraldehyde-3-phosphate dehydrogenase
|- align="center"
|- align="center"
Line 92: Line 114:
| ENSP00000448039
| ENSP00000448039
| 8
| 8
-
| 102381000-102382292(+)
+
| 102381000
 +
| 102382292
 +
| +  
| align="left"| Similar to Nascent polypeptide-associated complex subunit alpha
| align="left"| Similar to Nascent polypeptide-associated complex subunit alpha
|- align="center"
|- align="center"
Line 99: Line 123:
| ENSP00000434657
| ENSP00000434657
| 11
| 11
-
| 75276140-75278337(+)
+
| 75276140-75278337
 +
| +  
| align="left"| Similar to Serpin H1
| align="left"| Similar to Serpin H1
|- align="center"
|- align="center"
Line 106: Line 131:
| ENSP00000295470
| ENSP00000295470
| 4
| 4
-
| 83345781-83350477(-)
+
| 83345781
 +
| 83350477
 +
| -  
| align="left"| Similar to Heterogeneous nuclear ribonucleoprotein D-like
| align="left"| Similar to Heterogeneous nuclear ribonucleoprotein D-like
|- align="center"
|- align="center"
Line 113: Line 140:
| ENSP00000229239  
| ENSP00000229239  
| 12
| 12
-
| 6643975-6647419(+)
+
| 6643975
 +
| 6647419
 +
| +
| align="left"| Glyceraldehyde-3-phosphate dehydrogenase
| align="left"| Glyceraldehyde-3-phosphate dehydrogenase
|- align="center"
|- align="center"
Line 120: Line 149:
| ENSP00000333667  
| ENSP00000333667  
| 12
| 12
-
| 57623494-57628248(+)
+
| 57623494
 +
| 57628248
 +
| +  
| align="left"| Serine hydroxymethyltransferase, mitochondrial isoform 3
| align="left"| Serine hydroxymethyltransferase, mitochondrial isoform 3
|- align="center"
|- align="center"
Line 127: Line 158:
| ENSP00000362329   
| ENSP00000362329   
| 17
| 17
-
| 8706041-8770994(-)
+
| 8706041
 +
| 8770994
 +
| -
| align="left"| Similar to Inorganic pyrophosphatase
| align="left"| Similar to Inorganic pyrophosphatase
|- align="center"
|- align="center"
Line 134: Line 167:
| ENSP00000264998   
| ENSP00000264998   
| 22
| 22
-
| 22735202-23248967(+)
+
| 22735202
 +
| 23248967
 +
| +
| align="left"| Serotransferrin precursor
| align="left"| Serotransferrin precursor
|- align="center"
|- align="center"
Line 141: Line 176:
| ENSP00000419425   
| ENSP00000419425   
| 7
| 7
-
| 44836279-44841226(+)
+
| 44836279
 +
| 44841226
 +
| +  
| align="left"| Peptidyl-prolyl cis-trans isomerase A
| align="left"| Peptidyl-prolyl cis-trans isomerase A
|- align="center"
|- align="center"
Line 148: Line 185:
| ENSP00000280326   
| ENSP00000280326   
| 5
| 5
-
| 10250392-10265190(+)
+
| 10250392
 +
| 10265190
 +
| +  
| align="left"| T-complex protein 1 subunit epsilon
| align="left"| T-complex protein 1 subunit epsilon
|- align="center"
|- align="center"
Line 155: Line 194:
| ENSP00000234590   
| ENSP00000234590   
| 1
| 1
-
| 8923173-8939151(-)
+
| 8923173
 +
| 8939151
 +
| -  
| align="left"| Similar to enolase 1
| align="left"| Similar to enolase 1
|- align="center"
|- align="center"
Line 162: Line 203:
| -   
| -   
| 6
| 6
-
| 90556309-90584148(+)
+
| 90556309
 +
| 90584148
 +
| +
| align="left"| CASP8-associated protein 2
| align="left"| CASP8-associated protein 2
|- align="center"
|- align="center"
Line 169: Line 212:
| -   
| -   
| 14
| 14
-
| 73957670-73960098(+)
+
| 73957670
 +
| 73960098
 +
| +
| align="left"| Lysine-specific demethylase NO66
| align="left"| Lysine-specific demethylase NO66
|- align="center"
|- align="center"
Line 176: Line 221:
| -   
| -   
| 22
| 22
-
| 39898367-39911775(+)
+
| 39898367
 +
| 39911775
 +
| +  
| align="left"| Uncharacterized protein
| align="left"| Uncharacterized protein
|- align="center"
|- align="center"
Line 183: Line 230:
| -   
| -   
| 7
| 7
-
| 75616301-75623934(-)
+
| 75616301
 +
| 75623934
 +
| -  
| align="left"| Similar to Transmembrane protein 120A
| align="left"| Similar to Transmembrane protein 120A
|- align="center"
|- align="center"
Line 190: Line 239:
| -   
| -   
| 7
| 7
-
| 75616302-75623977(-)
+
| 75616302
 +
| 75623977
 +
| -  
| align="left"| Transmembrane protein 120A.
| align="left"| Transmembrane protein 120A.
|- align="center"
|- align="center"
Line 197: Line 248:
| -   
| -   
| 4
| 4
-
| 190394301-190396344(+)
+
| 190394301
 +
| 190396344
 +
| +  
| align="left"| Similar to Uncharacterized protein
| align="left"| Similar to Uncharacterized protein
|- align="center"
|- align="center"
Line 204: Line 257:
| -   
| -   
| X
| X
-
| 56755685-56845615(+)
+
| 56755685
 +
| 56845615
 +
| +  
| align="left"| Hypothetical short protein
| align="left"| Hypothetical short protein
|- align="center"
|- align="center"
Line 211: Line 266:
| -   
| -   
| 20
| 20
-
| 10394177-10401408(-)
+
| 10394177
 +
| 10401408
 +
| -
| align="left"| Hypothetical short protein
| align="left"| Hypothetical short protein
|- align="center"
|- align="center"
Line 218: Line 275:
| -   
| -   
| 16
| 16
-
| 4838457-4846282(+)
+
| 4838457
 +
| 4846282
 +
| +  
| align="left"| Similar to RGD1563547
| align="left"| Similar to RGD1563547
|- align="center"
|- align="center"
Line 225: Line 284:
| ENSP00000342940  
| ENSP00000342940  
| 5
| 5
-
| 77656408-77772310(+)
+
| 77656408
 +
| 77772310
 +
| +  
| align="left"| Secretory carrier-associated membrane protein 1  
| align="left"| Secretory carrier-associated membrane protein 1  
|- align="center"
|- align="center"
Line 232: Line 293:
| ENSP00000423281  
| ENSP00000423281  
| 1
| 1
-
| 145096428-145116582(+)
+
| 145096428
 +
| 145116582
 +
| +  
| align="left"| Similar to Vesicle-trafficking protein SEC22b
| align="left"| Similar to Vesicle-trafficking protein SEC22b
|- align="center"
|- align="center"
Line 239: Line 302:
| ENSP00000279839  
| ENSP00000279839  
| 11
| 11
-
| 94696512-94706716(-)
+
| 94696512
 +
| 94706716
 +
| -
| align="left"| Protein CWC15 homolog.
| align="left"| Protein CWC15 homolog.
|- align="center"
|- align="center"
Line 246: Line 311:
| ENSP00000381644  
| ENSP00000381644  
| 3
| 3
-
| 53321387-53381637(-)
+
| 53321387
 +
| 53381637
 +
| -  
| align="left"| MRNA-decapping enzyme 1A.
| align="left"| MRNA-decapping enzyme 1A.
|- align="center"
|- align="center"
Line 253: Line 320:
| ENSP00000300793   
| ENSP00000300793   
| 11
| 11
-
| 118938491-118952681(+)
+
| 118938491
 +
| 118952681
 +
| +  
| align="left"| Similar to Vacuolar protein sorting-associated protein 11 homolog
| align="left"| Similar to Vacuolar protein sorting-associated protein 11 homolog
|- align="center"
|- align="center"
Line 260: Line 329:
| ENSP00000399565  
| ENSP00000399565  
| 11
| 11
-
| 94800156-94802666(+)
+
| 94800156
 +
| 94802666
 +
| +
| align="left"| Serine/arginine-rich splicing factor 8
| align="left"| Serine/arginine-rich splicing factor 8
|- align="center"
|- align="center"
Line 267: Line 338:
| ENSP00000299933
| ENSP00000299933
| 19
| 19
-
| 58816743-58827018(+)
+
| 58816743
 +
| 58827018
 +
| +
| align="left"| Hypothetical protein.
| align="left"| Hypothetical protein.
|- align="center"
|- align="center"
Line 274: Line 347:
| ENSP00000368753
| ENSP00000368753
| 8
| 8
-
| 64081202-64123304(+)
+
| 64081202
 +
| 64123304
 +
| +  
| align="left"| Similar to YTH domain family protein 3
| align="left"| Similar to YTH domain family protein 3
|- align="center"
|- align="center"
Line 281: Line 356:
| ENSP00000423281
| ENSP00000423281
| 1
| 1
-
| 145096428-145116582(+)
+
| 145096428
 +
| 145116582
 +
| +
| align="left"| Similar to Vesicle-trafficking protein SEC22b
| align="left"| Similar to Vesicle-trafficking protein SEC22b
|- align="center"
|- align="center"
Line 288: Line 365:
| ENSP00000395088
| ENSP00000395088
| 3
| 3
-
| 196669545-196670884(+)
+
| 196669545
 +
| 196670884
 +
| +
| align="left"| Hypothetical protein.
| align="left"| Hypothetical protein.
|- align="center"
|- align="center"
Line 295: Line 374:
| ENSP00000339048
| ENSP00000339048
| 11
| 11
-
| 118895065-118901419(-)
+
| 118895065
 +
| 118901419
 +
| -
| align="left"| Glucose-6-phosphate translocase isoform 1
| align="left"| Glucose-6-phosphate translocase isoform 1
|- align="center"
|- align="center"
Line 302: Line 383:
| ENSP00000276681  
| ENSP00000276681  
| 8
| 8
-
| 120220633-120257912(+)
+
| 120220633
 +
| 120257912
 +
| +
| align="left"| Protein MAL2
| align="left"| Protein MAL2
|- align="center"
|- align="center"
Line 309: Line 392:
| ENSP00000369988
| ENSP00000369988
| 19
| 19
-
| 10736229-10755232(+)
+
| 10736229
 +
| 10755232
 +
| +
| align="left"| Choline transporter-like protein 2
| align="left"| Choline transporter-like protein 2
|- align="center"
|- align="center"
Line 316: Line 401:
| ENSP00000301323
| ENSP00000301323
| 8
| 8
-
| 145736814-145743168(-)
+
| 145736814
 +
| 145743168
 +
| -
| align="left"| ATP-dependent DNA helicase Q4
| align="left"| ATP-dependent DNA helicase Q4
|- align="center"
|- align="center"
Line 323: Line 410:
| ENSP00000300793
| ENSP00000300793
| 11
| 11
-
| 118938493-118952675(+)
+
| 118938493
 +
| 118952675
 +
| +  
| align="left"| Vacuolar protein sorting-associated protein 11 homolog
| align="left"| Vacuolar protein sorting-associated protein 11 homolog
|- align="center"
|- align="center"
Line 330: Line 419:
| ENSP00000412071
| ENSP00000412071
| 8
| 8
-
| 145106176-145114935(-)
+
| 145106176
 +
| 145114935
 +
| -  
| align="left"| 5-oxoprolinase
| align="left"| 5-oxoprolinase
|- align="center"
|- align="center"
Line 337: Line 428:
| ENSP00000320510  
| ENSP00000320510  
| 17
| 17
-
| 48212696-48227874(-)
+
| 48212696
 +
| 48227874
 +
| -  
| align="left"| Neurabin-2
| align="left"| Neurabin-2
|- align="center"
|- align="center"
Line 344: Line 437:
| ENSP00000264998
| ENSP00000264998
| 3
| 3
-
| 133465237-133497635(+)
+
| 133465237
 +
| 133497635
 +
| +
| align="left"| Serotransferrin precursor
| align="left"| Serotransferrin precursor
|- align="center"
|- align="center"
Line 351: Line 446:
| ENSP00000419425
| ENSP00000419425
| 7
| 7
-
| 44836279-44841226(+)
+
| 44836279
 +
| 44841226
 +
| +
| align="left"| Peptidyl-prolyl cis-trans isomerase A
| align="left"| Peptidyl-prolyl cis-trans isomerase A
|- align="center"
|- align="center"
Line 358: Line 455:
| ENSP00000280326
| ENSP00000280326
| 5
| 5
-
| 10250392-10265190(+)
+
| 10250392
 +
| 10265190
 +
| +
| align="left"| T-complex protein 1 subunit epsilon
| align="left"| T-complex protein 1 subunit epsilon
|}
|}

Revision as of 15:14, 31 January 2013

HS PLUS is a collection of human protein sequences to be used in addition to the ENSEMBL collection protein sequences.

Accessions

Accession Type Example SV Chr Start End Str Description
HIP000257735.1 HV - 6_apd_hap1 3098081-3100314 + Heat shock 70 kDa protein 1A/1B
HIP000046027.1 IG-C - 14 106207685 106725733 - Ig gamma-1 chain C region
HIP000046082.1 IG-C - 14 106202680 106791519 - Similar to Ig gamma-1 chain C region
HIP000046058.1 IG-H - na na Ig heavy variable
HIP000147131.1 IG-L - 22 22735202 23248967 + Similar to Ig lambda-2 chain C regions
HIP000025842.1 SV ENSP00000262710 14 23527776 23564332 - Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5.
HIP000210721.1 SV ENSP00000369528 10 5807192 5811376 - Similar to Rab GDP dissociation inhibitor beta
HIP000104615.1 SV ENSP00000341168 5 170818369 170837886 + Similar to Nucleophosmin
HIP000022213.1 SV ENSP00000456022 16 69404113 69419874 - Similar to Telomeric repeat-binding factor 2
HIP000022571.1 SV ENSP00000300408 17 47482353 47490627 - Prohibitin
HIP000057656.1 SV ENSP00000380068 12 6643985 6647535 + Glyceraldehyde-3-phosphate dehydrogenase
HIP000156208.1 SV ENSP00000448039 8 102381000 102382292 + Similar to Nascent polypeptide-associated complex subunit alpha
HIP000094486.1 SV ENSP00000434657 11 75276140-75278337 + Similar to Serpin H1
HIP000079628.1 SV ENSP00000295470 4 83345781 83350477 - Similar to Heterogeneous nuclear ribonucleoprotein D-like
HIP000146458.1 SV ENSP00000229239 12 6643975 6647419 + Glyceraldehyde-3-phosphate dehydrogenase
HIP000254793.1 SV ENSP00000333667 12 57623494 57628248 + Serine hydroxymethyltransferase, mitochondrial isoform 3
HIP000082035.1 SV ENSP00000362329 17 8706041 8770994 - Similar to Inorganic pyrophosphatase
HIP000256952.1 AP ENSP00000264998 22 22735202 23248967 + Serotransferrin precursor
HIP000112393.1 AP ENSP00000419425 7 44836279 44841226 + Peptidyl-prolyl cis-trans isomerase A
HIP000192016.1 AP ENSP00000280326 5 10250392 10265190 + T-complex protein 1 subunit epsilon
HIP000195327.1 AP ENSP00000234590 1 8923173 8939151 - Similar to enolase 1
HIP000021875.1 NOV - 6 90556309 90584148 + CASP8-associated protein 2
HIP000040439.1 NOV - 14 73957670 73960098 + Lysine-specific demethylase NO66
HIP000207747.1 NOV - 22 39898367 39911775 + Uncharacterized protein
HIP000089530.1 NOV - 7 75616301 75623934 - Similar to Transmembrane protein 120A
HIP000089527.1 NOV - 7 75616302 75623977 - Transmembrane protein 120A.
HIP000146783.1 NOV - 4 190394301 190396344 + Similar to Uncharacterized protein
HIP000055517.1 NOV - X 56755685 56845615 + Hypothetical short protein
HIP000100288.1 NOV - 20 10394177 10401408 - Hypothetical short protein
HIP000036859.1 NOV - 16 4838457 4846282 + Similar to RGD1563547
HIP000096511.1 RET ENSP00000342940 5 77656408 77772310 + Secretory carrier-associated membrane protein 1
HIP000111969.1 RET ENSP00000423281 1 145096428 145116582 + Similar to Vesicle-trafficking protein SEC22b
HIP000109009.1 RET ENSP00000279839 11 94696512 94706716 - Protein CWC15 homolog.
HIP000044400.1 RET ENSP00000381644 3 53321387 53381637 - MRNA-decapping enzyme 1A.
HIP000024206.1 RET ENSP00000300793 11 118938491 118952681 + Similar to Vacuolar protein sorting-associated protein 11 homolog
HIP000096222.1 RET ENSP00000399565 11 94800156 94802666 + Serine/arginine-rich splicing factor 8
HIP000040949.1 RET ENSP00000299933 19 58816743 58827018 + Hypothetical protein.
HIP000096114.1 RET ENSP00000368753 8 64081202 64123304 + Similar to YTH domain family protein 3
HIP000111969.1 RET ENSP00000423281 1 145096428 145116582 + Similar to Vesicle-trafficking protein SEC22b
HIP000112061.1 RET ENSP00000395088 3 196669545 196670884 + Hypothetical protein.
HIP000023279.1 RET ENSP00000339048 11 118895065 118901419 - Glucose-6-phosphate translocase isoform 1
HIP000095666.1 RET ENSP00000276681 8 120220633 120257912 + Protein MAL2
HIP000055346.1 RET ENSP00000369988 19 10736229 10755232 + Choline transporter-like protein 2
HIP000049979.1 RET ENSP00000301323 8 145736814 145743168 - ATP-dependent DNA helicase Q4
HIP000024207.1 RET ENSP00000300793 11 118938493 118952675 + Vacuolar protein sorting-associated protein 11 homolog
HIP000060730.1 RET ENSP00000412071 8 145106176 145114935 - 5-oxoprolinase
HIP000078193.1 RET ENSP00000320510 17 48212696 48227874 - Neurabin-2
HIP000256952.1 RET ENSP00000264998 3 133465237 133497635 + Serotransferrin precursor
HIP000112393.1 RET ENSP00000419425 7 44836279 44841226 + Peptidyl-prolyl cis-trans isomerase A
HIP000192016.1 RET ENSP00000280326 5 10250392 10265190 + T-complex protein 1 subunit epsilon
Retrieved from "http://wiki.thegpm.org/wiki/Hs_plus"
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