Hs plus

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From TheGPMWiki

(Difference between revisions)

Revision as of 15:19, 31 January 2013

HS PLUS is a collection of human protein sequences to be used in addition to the ENSEMBL collection protein sequences.

Accessions

Accession	Type	Example SV	Chr	Start	End	Str	Description
HIP000257735.1	HV	—	6_apd_hap1	3098081	3100314	+	Heat shock 70 kDa protein 1A/1B
HIP000046027.1	IG-C	—	14	106207685	106725733	-	Ig gamma-1 chain C region
HIP000046082.1	IG-C	—	14	106202680	106791519	-	Similar to Ig gamma-1 chain C region
HIP000046058.1	IG-H	—	—	—	—	—	Ig heavy variable
HIP000147131.1	IG-L	—	22	22735202	23248967	+	Similar to Ig lambda-2 chain C regions
HIP000025842.1	SV	ENSP00000262710	14	23527776	23564332	-	Similar to Apoptotic chromatin condensation inducer in the nucleus isoform 5.
HIP000210721.1	SV	ENSP00000369528	10	5807192	5811376	-	Similar to Rab GDP dissociation inhibitor beta
HIP000104615.1	SV	ENSP00000341168	5	170818369	170837886	+	Similar to Nucleophosmin
HIP000022213.1	SV	ENSP00000456022	16	69404113	69419874	-	Similar to Telomeric repeat-binding factor 2
HIP000022571.1	SV	ENSP00000300408	17	47482353	47490627	-	Prohibitin
HIP000057656.1	SV	ENSP00000380068	12	6643985	6647535	+	Glyceraldehyde-3-phosphate dehydrogenase
HIP000156208.1	SV	ENSP00000448039	8	102381000	102382292	+	Similar to Nascent polypeptide-associated complex subunit alpha
HIP000094486.1	SV	ENSP00000434657	11	75276140	75278337	+	Similar to Serpin H1
HIP000079628.1	SV	ENSP00000295470	4	83345781	83350477	-	Similar to Heterogeneous nuclear ribonucleoprotein D-like
HIP000146458.1	SV	ENSP00000229239	12	6643975	6647419	+	Glyceraldehyde-3-phosphate dehydrogenase
HIP000254793.1	SV	ENSP00000333667	12	57623494	57628248	+	Serine hydroxymethyltransferase, mitochondrial isoform 3
HIP000082035.1	SV	ENSP00000362329	17	8706041	8770994	-	Similar to Inorganic pyrophosphatase
HIP000256952.1	AP	ENSP00000264998	22	22735202	23248967	+	Serotransferrin precursor
HIP000112393.1	AP	ENSP00000419425	7	44836279	44841226	+	Peptidyl-prolyl cis-trans isomerase A
HIP000192016.1	AP	ENSP00000280326	5	10250392	10265190	+	T-complex protein 1 subunit epsilon
HIP000195327.1	AP	ENSP00000234590	1	8923173	8939151	-	Similar to enolase 1
HIP000021875.1	NOV	—	6	90556309	90584148	+	CASP8-associated protein 2
HIP000040439.1	NOV	—	14	73957670	73960098	+	Lysine-specific demethylase NO66
HIP000207747.1	NOV	—	22	39898367	39911775	+	Uncharacterized protein
HIP000089530.1	NOV	—	7	75616301	75623934	-	Similar to Transmembrane protein 120A
HIP000089527.1	NOV	—	7	75616302	75623977	-	Transmembrane protein 120A.
HIP000146783.1	NOV	—	4	190394301	190396344	+	Similar to Uncharacterized protein
HIP000055517.1	NOV	—	X	56755685	56845615	+	Hypothetical short protein
HIP000100288.1	NOV	—	20	10394177	10401408	-	Hypothetical short protein
HIP000036859.1	NOV	—	16	4838457	4846282	+	Similar to RGD1563547
HIP000096511.1	RET	ENSP00000342940	5	77656408	77772310	+	Secretory carrier-associated membrane protein 1
HIP000111969.1	RET	ENSP00000423281	1	145096428	145116582	+	Similar to Vesicle-trafficking protein SEC22b
HIP000109009.1	RET	ENSP00000279839	11	94696512	94706716	-	Protein CWC15 homolog.
HIP000044400.1	RET	ENSP00000381644	3	53321387	53381637	-	MRNA-decapping enzyme 1A.
HIP000024206.1	RET	ENSP00000300793	11	118938491	118952681	+	Similar to Vacuolar protein sorting-associated protein 11 homolog
HIP000096222.1	RET	ENSP00000399565	11	94800156	94802666	+	Serine/arginine-rich splicing factor 8
HIP000040949.1	RET	ENSP00000299933	19	58816743	58827018	+	Hypothetical protein.
HIP000096114.1	RET	ENSP00000368753	8	64081202	64123304	+	Similar to YTH domain family protein 3
HIP000111969.1	RET	ENSP00000423281	1	145096428	145116582	+	Similar to Vesicle-trafficking protein SEC22b
HIP000112061.1	RET	ENSP00000395088	3	196669545	196670884	+	Hypothetical protein.
HIP000023279.1	RET	ENSP00000339048	11	118895065	118901419	-	Glucose-6-phosphate translocase isoform 1
HIP000095666.1	RET	ENSP00000276681	8	120220633	120257912	+	Protein MAL2
HIP000055346.1	RET	ENSP00000369988	19	10736229	10755232	+	Choline transporter-like protein 2
HIP000049979.1	RET	ENSP00000301323	8	145736814	145743168	-	ATP-dependent DNA helicase Q4
HIP000024207.1	RET	ENSP00000300793	11	118938493	118952675	+	Vacuolar protein sorting-associated protein 11 homolog
HIP000060730.1	RET	ENSP00000412071	8	145106176	145114935	-	5-oxoprolinase
HIP000078193.1	RET	ENSP00000320510	17	48212696	48227874	-	Neurabin-2
HIP000256952.1	RET	ENSP00000264998	3	133465237	133497635	+	Serotransferrin precursor
HIP000112393.1	RET	ENSP00000419425	7	44836279	44841226	+	Peptidyl-prolyl cis-trans isomerase A
HIP000192016.1	RET	ENSP00000280326	5	10250392	10265190	+	T-complex protein 1 subunit epsilon

Retrieved from "http://wiki.thegpm.org/wiki/Hs_plus"

@@ Line 15: / Line 15: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000257735.1 HIP000257735.1]
 | HV
-| -
+| &mdash;
 | 6_apd_hap1
-| 3098081-3100314
+| 3098081
+| 3100314
 | +
 | align="left"| Heat shock 70 kDa protein 1A/1B
@@ Line 23: / Line 24: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000046027.1 HIP000046027.1]
 | IG-C
-| -
+| &mdash;
 | 14
 | 106207685
@@ Line 32: / Line 33: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000046082.1 HIP000046082.1]
 | IG-C
-| -
+| &mdash;
 | 14
 | 106202680
@@ Line 41: / Line 42: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000046058.1 HIP000046058.1]
 | IG-H
-| -
+| &mdash;
-| na
+| &mdash;
-| na
+| &mdash;
-|
+| &mdash;
+| &mdash;
 | align="left"| Ig heavy variable
 |- align="center"
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000147131.1 HIP000147131.1]
 | IG-L
-| -
+| &mdash;
 | 22
 | 22735202
@@ Line 123: / Line 125: @@
 | ENSP00000434657
 | 11
-| 75276140-75278337
+| 75276140
+| 75278337
 | +
 | align="left"| Similar to Serpin H1
@@ Line 201: / Line 204: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000021875.1 HIP000021875.1]
 | NOV
-| -
+| &mdash;
 | 6
 | 90556309
@@ Line 210: / Line 213: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000040439.1 HIP000040439.1]
 | NOV
-| -
+| &mdash;
 | 14
 | 73957670
@@ Line 219: / Line 222: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000207747.1 HIP000207747.1]
 | NOV
-| -
+| &mdash;
 | 22
 | 39898367
@@ Line 228: / Line 231: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000089530.1 HIP000089530.1]
 | NOV
-| -
+| &mdash;
 | 7
 | 75616301
@@ Line 237: / Line 240: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000089527.1 HIP000089527.1]
 | NOV
-| -
+| &mdash;
 | 7
 | 75616302
@@ Line 246: / Line 249: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000146783.1 HIP000146783.1]
 | NOV
-| -
+| &mdash;
 | 4
 | 190394301
@@ Line 255: / Line 258: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000055517.1 HIP000055517.1]
 | NOV
-| -
+| &mdash;
 | X
 | 56755685
@@ Line 264: / Line 267: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000100288.1 HIP000100288.1]
 | NOV
-| -
+| &mdash;
 | 20
 | 10394177
@@ Line 273: / Line 276: @@
 | [http://h-invitational.jp/hinv/protein/protein_view.cgi?hip_id=HIP000036859.1 HIP000036859.1]
 | NOV
-| -
+| &mdash;
 | 16
 | 4838457

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Revision as of 15:19, 31 January 2013

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