This script searches GPMDB for protein identifications based on accession number.
The one required arugment is label, which is a protein accession number. The results of the search are all identifications of the accession number supplied, ranked by increasing expect value and displayed twenty results at a time. Each row consists of the expect value, links to other data views and a coverage diagram. Optionally, the proex argument may be supplied; omitting it results in a default proex value of -1. This value is not used in the search, but is used to build the links to other scripts which expect it.
The result navigation links are found directly above the currently displayed results; "best" is a link back to dblist_label.pl, "previous X" and "next X", where X is a number between 1 and 20 depending on your location within the result set, and "Last", which will display the 20 results with the highest expect scores.
The per-identification links are:
The coverage diagram is an Adobe SVG element depicting the sections of the protein which are covered by the peptides identified for this protein in the original data file.
This script uses the following tables: protein, result, proseq.