(New page: This script shows the result of searches done on the MRM data stored in the GPM. Searching can be done on any combination of parent ion mass, peptide sequence or accession num...) |
m (→Display Elements - Mass or Peptide Sequence Search) |
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**'''pos''': the position of this peptide in the protein identified by the accession number on that row. | **'''pos''': the position of this peptide in the protein identified by the accession number on that row. | ||
**'''peaks''': a compound field depicting up to twenty peaks in the spectrum for this peptide: | **'''peaks''': a compound field depicting up to twenty peaks in the spectrum for this peptide: | ||
- | *** | + | ***The top row is the list of mass-to-charge ratios for the spectrum. |
***The bottom row is the normalized intensity of the signal. | ***The bottom row is the normalized intensity of the signal. | ||
***Two buttons: the ''Spectrum'' button leads to [[Technical Overview, peptide_xlib.pl|peptide_xlib.pl]] for this spectrum. The ''Details'' button leads to [[Technical Overview, peak_details.pl|peak_details.pl]], to give a more detailed explanation of the spectrum. | ***Two buttons: the ''Spectrum'' button leads to [[Technical Overview, peptide_xlib.pl|peptide_xlib.pl]] for this spectrum. The ''Details'' button leads to [[Technical Overview, peak_details.pl|peak_details.pl]], to give a more detailed explanation of the spectrum. |
This script shows the result of searches done on the MRM data stored in the GPM. Searching can be done on any combination of parent ion mass, peptide sequence or accession number.
This script has two different displays; one for mass or sequence searching and one for accession numbers.